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added result sending and job status updating. version 1.0.0

cjs3
Stephen Lorenz 3 years ago
parent
commit
5421bfb284
  1. 4
      bin/lrmix.R
  2. 16
      cjs-data/init/input/reqbt-1-1.csv
  3. 16
      cjs-data/init/input/reqbt-1-2.csv
  4. 1
      cjs-data/init/input/reqbt-1-reqbt-1-1-Asian.json
  5. 1
      cjs-data/init/input/reqbt-1-reqbt-1-1-Black.json
  6. 1
      cjs-data/init/input/reqbt-1-reqbt-1-1-Caucasian.json
  7. 1
      cjs-data/init/input/reqbt-1-reqbt-1-1-Hispanic.json
  8. 1
      cjs-data/init/input/reqbt-1-reqbt-1-2-Asian.json
  9. 1
      cjs-data/init/input/reqbt-1-reqbt-1-2-Black.json
  10. 1
      cjs-data/init/input/reqbt-1-reqbt-1-2-Caucasian.json
  11. 1
      cjs-data/init/input/reqbt-1-reqbt-1-2-Hispanic.json
  12. 42
      cjs-data/init/input/reqbt-1.tsv
  13. 16
      cjs-data/init/input/reqbt-2-1.csv
  14. 1
      cjs-data/init/input/reqbt-2-reqbt-2-1-Asian.json
  15. 1
      cjs-data/init/input/reqbt-2-reqbt-2-1-Black.json
  16. 1
      cjs-data/init/input/reqbt-2-reqbt-2-1-Caucasian.json
  17. 1
      cjs-data/init/input/reqbt-2-reqbt-2-1-Hispanic.json
  18. 29
      cjs-data/init/input/reqbt-2.tsv
  19. 16
      cjs-data/init/input/reqbt-3-1.csv
  20. 1
      cjs-data/init/input/reqbt-3-reqbt-3-1-Asian.json
  21. 1
      cjs-data/init/input/reqbt-3-reqbt-3-1-Black.json
  22. 1
      cjs-data/init/input/reqbt-3-reqbt-3-1-Caucasian.json
  23. 1
      cjs-data/init/input/reqbt-3-reqbt-3-1-Hispanic.json
  24. 31
      cjs-data/init/input/reqbt-3.tsv
  25. 16
      cjs-data/init/input/reqbt-4-1.csv
  26. 1
      cjs-data/init/input/reqbt-4-reqbt-4-1-Asian.json
  27. 1
      cjs-data/init/input/reqbt-4-reqbt-4-1-Black.json
  28. 1
      cjs-data/init/input/reqbt-4-reqbt-4-1-Caucasian.json
  29. 1
      cjs-data/init/input/reqbt-4-reqbt-4-1-Hispanic.json
  30. 31
      cjs-data/init/input/reqbt-4.tsv
  31. 16
      cjs-data/init/input/reqbt-5-1.csv
  32. 16
      cjs-data/init/input/reqbt-5-2.csv
  33. 1
      cjs-data/init/input/reqbt-5-reqbt-5-1-Asian.json
  34. 1
      cjs-data/init/input/reqbt-5-reqbt-5-1-Black.json
  35. 1
      cjs-data/init/input/reqbt-5-reqbt-5-1-Caucasian.json
  36. 1
      cjs-data/init/input/reqbt-5-reqbt-5-1-Hispanic.json
  37. 1
      cjs-data/init/input/reqbt-5-reqbt-5-2-Asian.json
  38. 1
      cjs-data/init/input/reqbt-5-reqbt-5-2-Black.json
  39. 31
      cjs-data/init/input/reqbt-5.tsv
  40. 16
      cjs-data/init/input/reqbt-6-2.csv
  41. 1
      cjs-data/init/input/reqbt-6-reqbt-6-2-Asian.json
  42. 1
      cjs-data/init/input/reqbt-6-reqbt-6-2-Black.json
  43. 1
      cjs-data/init/input/reqbt-6-reqbt-6-2-Caucasian.json
  44. 1
      cjs-data/init/input/reqbt-6-reqbt-6-2-Hispanic.json
  45. 31
      cjs-data/init/input/reqbt-6.tsv
  46. 2
      cjs-data/init/output/qualitative_reqbt-1-1-Caucasian.csv
  47. 2
      cjs-data/init/output/qualitative_reqbt-1-1-Hispanic.csv
  48. 2
      cjs-data/init/output/qualitative_reqbt-2-1-Asian.csv
  49. 2
      cjs-data/init/output/qualitative_reqbt-3-1-Asian.csv
  50. 2
      cjs-data/init/output/qualitative_reqbt-3-1-Black.csv
  51. 2
      cjs-data/init/output/qualitative_reqbt-3-1-Caucasian.csv
  52. 2
      cjs-data/init/output/qualitative_reqbt-4-1-Asian.csv
  53. 2
      cjs-data/init/output/qualitative_reqbt-4-1-Black.csv
  54. 2
      cjs-data/init/output/qualitative_reqbt-4-1-Caucasian.csv
  55. 2
      cjs-data/init/output/qualitative_reqbt-5-1-Asian.csv
  56. 2
      cjs-data/init/output/qualitative_reqbt-5-1-Black.csv
  57. 2
      cjs-data/init/output/qualitative_reqbt-5-1-Caucasian.csv
  58. 2
      cjs-data/init/output/qualitative_reqbt-5-1-Hispanic.csv
  59. 2
      cjs-data/init/output/qualitative_reqbt-5-2-Asian.csv
  60. 2
      cjs-data/init/output/qualitative_reqbt-6-2-Asian.csv
  61. 2
      cjs-data/init/output/qualitative_reqbt-6-2-Black.csv
  62. 2
      cjs-data/init/output/qualitative_reqbt-6-2-Caucasian.csv
  63. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-1-1.csv
  64. 46
      cjs-data/musky-stabbed-my-ac/input/reqbt-1.tsv
  65. 18
      cjs-data/musky-stabbed-my-ac/input/reqbt-10-2.csv
  66. 36
      cjs-data/musky-stabbed-my-ac/input/reqbt-10.tsv
  67. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-1.csv
  68. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-2.csv
  69. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Asian.json
  70. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Black.json
  71. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Caucasian.json
  72. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Hispanic.json
  73. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Asian.json
  74. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Black.json
  75. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Caucasian.json
  76. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Hispanic.json
  77. 31
      cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv
  78. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-1.csv
  79. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-2.csv
  80. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Asian.json
  81. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Black.json
  82. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Caucasian.json
  83. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Hispanic.json
  84. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Asian.json
  85. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Black.json
  86. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Caucasian.json
  87. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Hispanic.json
  88. 31
      cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv
  89. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-1.csv
  90. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-2.csv
  91. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Asian.json
  92. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Black.json
  93. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Caucasian.json
  94. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Hispanic.json
  95. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Asian.json
  96. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Black.json
  97. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Caucasian.json
  98. 1
      cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Hispanic.json
  99. 31
      cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv
  100. 16
      cjs-data/musky-stabbed-my-ac/input/reqbt-103-1.csv

4
bin/lrmix.R

@ -142,7 +142,7 @@ if(dropin) {
setup <- paste0("T",threshT,"_fst",fst,"_pC",pC,"_C",nC)
outf <- paste0(testFile$output_dir, "/qualitative_", testFile$test_name, "-", testFile$population, ".csv") # cjs: stephen
cn=c("EvidFile","POI","LR","Dropout")
cn=c("EvidFile","POI","LR","Dropout","Race") # cjs
out = matrix(nrow=0,ncol=length(cn))
colnames(out) = cn
@ -186,7 +186,7 @@ tmpHp = quantile(dihp,dropqq)
LR <- LRmc[dropind] #get conservative LR in LRmix
# update out object
out = rbind(out, c(testFile$evidence_name,rN[j],LR,signif(dhat,3)))
out = rbind(out, c(testFile$evidence_name,rN[j],LR,signif(dhat,3),testFile$population))
# Export overall results
write.table(out,file=outf,row.names=FALSE)

16
cjs-data/init/input/reqbt-1-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-1-1,D5S818,9,11
reqbt-1-1,D13S317,11,11
reqbt-1-1,D19S433,13,15
reqbt-1-1,D16S539,11,11
reqbt-1-1,vWA,17,19
reqbt-1-1,D18S51,15,24
reqbt-1-1,D2S1338,20,20
reqbt-1-1,D21S11,29,29
reqbt-1-1,D8S1179,14,15
reqbt-1-1,TH01,6,9
reqbt-1-1,TPOX,9,11
reqbt-1-1,D3S1358,16,17
reqbt-1-1,FGA,18,21
reqbt-1-1,D7S820,10,12
reqbt-1-1,CSF1PO,10,10

16
cjs-data/init/input/reqbt-1-2.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-1-2,D13S317,12,12
reqbt-1-2,D21S11,29,31
reqbt-1-2,D19S433,12,16
reqbt-1-2,D18S51,15,22
reqbt-1-2,FGA,24,26
reqbt-1-2,D16S539,9,11
reqbt-1-2,D5S818,11,12
reqbt-1-2,D8S1179,10,12
reqbt-1-2,CSF1PO,10,12
reqbt-1-2,vWA,14,18
reqbt-1-2,TPOX,11,11
reqbt-1-2,TH01,6,9
reqbt-1-2,D7S820,11,11
reqbt-1-2,D2S1338,18,19
reqbt-1-2,D3S1358,15,18

1
cjs-data/init/input/reqbt-1-reqbt-1-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-1.csv", "population": "Asian", "test_name": "reqbt-1-1", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-1", "num_contributors": 2, "num_replicates": 3}

1
cjs-data/init/input/reqbt-1-reqbt-1-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-1.csv", "population": "Black", "test_name": "reqbt-1-1", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-1", "num_contributors": 2, "num_replicates": 3}

1
cjs-data/init/input/reqbt-1-reqbt-1-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-1.csv", "population": "Caucasian", "test_name": "reqbt-1-1", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-1", "num_contributors": 2, "num_replicates": 3}

1
cjs-data/init/input/reqbt-1-reqbt-1-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-1.csv", "population": "Hispanic", "test_name": "reqbt-1-1", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-1", "num_contributors": 2, "num_replicates": 3}

1
cjs-data/init/input/reqbt-1-reqbt-1-2-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-2.csv", "population": "Asian", "test_name": "reqbt-1-2", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-2", "num_contributors": 2, "num_replicates": 3}

1
cjs-data/init/input/reqbt-1-reqbt-1-2-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-2.csv", "population": "Black", "test_name": "reqbt-1-2", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-2", "num_contributors": 2, "num_replicates": 3}

1
cjs-data/init/input/reqbt-1-reqbt-1-2-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-2.csv", "population": "Caucasian", "test_name": "reqbt-1-2", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-2", "num_contributors": 2, "num_replicates": 3}

1
cjs-data/init/input/reqbt-1-reqbt-1-2-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-1-2.csv", "population": "Hispanic", "test_name": "reqbt-1-2", "evidence_name": "reqbt-1", "comparison_name": "reqbt-1-2", "num_contributors": 2, "num_replicates": 3}

42
cjs-data/init/input/reqbt-1.tsv

@ -0,0 +1,42 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 ADO UD1
reqbt-1_1 D5S818 9 11 12 false
reqbt-1_1 D13S317 12 false
reqbt-1_1 D19S433 12 13 14 16 false
reqbt-1_1 D16S539 9 11 false
reqbt-1_1 vWA 14 18 false
reqbt-1_1 D18S51 15 17 22 false
reqbt-1_1 D2S1338 19 false
reqbt-1_1 D21S11 29 31 false
reqbt-1_1 D8S1179 10 12 14 false
reqbt-1_1 TH01 6 9 false
reqbt-1_1 TPOX 11 false
reqbt-1_1 D3S1358 15 16 18 false
reqbt-1_1 FGA 18 24 26 false
reqbt-1_1 D7S820 10 11 false
reqbt-1_1 CSF1PO 12 false
reqbt-1_2 D5S818 9 11 12 false
reqbt-1_2 D13S317 12 false
reqbt-1_2 D19S433 12 15 16 false
reqbt-1_2 D16S539 8 9 11 false
reqbt-1_2 vWA 14 18 false
reqbt-1_2 D18S51 22 false
reqbt-1_2 D21S11 29 31 false
reqbt-1_2 D8S1179 10 12 14 false
reqbt-1_2 TH01 6 9 false
reqbt-1_2 TPOX 8 11 false
reqbt-1_2 D3S1358 15 16 18 false
reqbt-1_2 FGA 18 24 26 false
reqbt-1_2 D7S820 10 11 false
reqbt-1_2 CSF1PO 10 12 false
reqbt-1_3 D5S818 9 10 11 12 false
reqbt-1_3 D13S317 12 false
reqbt-1_3 D19S433 12 15 16 false
reqbt-1_3 D16S539 11 false
reqbt-1_3 vWA 14 18 false
reqbt-1_3 D21S11 29 31 false
reqbt-1_3 D8S1179 10 12 14 false
reqbt-1_3 TH01 6 9 9.3 false
reqbt-1_3 TPOX 11 false
reqbt-1_3 D3S1358 15 17 18 false
reqbt-1_3 FGA 24 26 false
reqbt-1_3 D7S820 9 11 false

16
cjs-data/init/input/reqbt-2-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-2-1,D8S1179,10,12
reqbt-2-1,D3S1358,15,18
reqbt-2-1,FGA,24,26
reqbt-2-1,D16S539,9,11
reqbt-2-1,vWA,14,18
reqbt-2-1,D5S818,11,12
reqbt-2-1,D7S820,11,11
reqbt-2-1,D13S317,12,12
reqbt-2-1,TH01,6,9
reqbt-2-1,TPOX,11,11
reqbt-2-1,D2S1338,18,19
reqbt-2-1,D18S51,15,22
reqbt-2-1,D19S433,12,16
reqbt-2-1,D21S11,29,31
reqbt-2-1,CSF1PO,10,12

1
cjs-data/init/input/reqbt-2-reqbt-2-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2-1.csv", "population": "Asian", "test_name": "reqbt-2-1", "evidence_name": "reqbt-2", "comparison_name": "reqbt-2-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-2-reqbt-2-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2-1.csv", "population": "Black", "test_name": "reqbt-2-1", "evidence_name": "reqbt-2", "comparison_name": "reqbt-2-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-2-reqbt-2-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2-1.csv", "population": "Caucasian", "test_name": "reqbt-2-1", "evidence_name": "reqbt-2", "comparison_name": "reqbt-2-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-2-reqbt-2-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-2-1.csv", "population": "Hispanic", "test_name": "reqbt-2-1", "evidence_name": "reqbt-2", "comparison_name": "reqbt-2-1", "num_contributors": 2, "num_replicates": 2}

29
cjs-data/init/input/reqbt-2.tsv

@ -0,0 +1,29 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 ADO UD1
reqbt-2_1 D8S1179 12 14 15 false
reqbt-2_1 D3S1358 14 15 17 false
reqbt-2_1 FGA 22 24 26 false
reqbt-2_1 D16S539 13 false
reqbt-2_1 vWA 17 18 false
reqbt-2_1 D5S818 10 11 12 false
reqbt-2_1 D7S820 10 false
reqbt-2_1 D13S317 8 11 12 false
reqbt-2_1 TH01 6 7 false
reqbt-2_1 TPOX 8 false
reqbt-2_1 D2S1338 20 false
reqbt-2_1 D18S51 12 16 false
reqbt-2_1 D19S433 13 15 false
reqbt-2_1 D21S11 29 31 32.2 false
reqbt-2_1 CSF1PO 10 11 false
reqbt-2_2 D8S1179 14 15 false
reqbt-2_2 D3S1358 14 17 false
reqbt-2_2 FGA 22 false
reqbt-2_2 D16S539 9 13 false
reqbt-2_2 vWA 17 false
reqbt-2_2 D5S818 10 12 false
reqbt-2_2 D7S820 10 false
reqbt-2_2 D13S317 11 12 false
reqbt-2_2 TH01 6 7 false
reqbt-2_2 TPOX 8 false
reqbt-2_2 D18S51 15 false
reqbt-2_2 D19S433 13 14 15 false
reqbt-2_2 D21S11 30.2 false

16
cjs-data/init/input/reqbt-3-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-3-1,D5S818,9,14
reqbt-3-1,D19S433,15.2,17
reqbt-3-1,CSF1PO,9,10
reqbt-3-1,D16S539,11,12
reqbt-3-1,TH01,6,7
reqbt-3-1,FGA,19,21
reqbt-3-1,D8S1179,11,13
reqbt-3-1,D18S51,12,14
reqbt-3-1,D3S1358,16,17
reqbt-3-1,vWA,15,16
reqbt-3-1,D7S820,10,12
reqbt-3-1,D13S317,8,10
reqbt-3-1,D21S11,29,31
reqbt-3-1,TPOX,9,10
reqbt-3-1,D2S1338,17,18

1
cjs-data/init/input/reqbt-3-reqbt-3-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3-1.csv", "population": "Asian", "test_name": "reqbt-3-1", "evidence_name": "reqbt-3", "comparison_name": "reqbt-3-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-3-reqbt-3-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3-1.csv", "population": "Black", "test_name": "reqbt-3-1", "evidence_name": "reqbt-3", "comparison_name": "reqbt-3-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-3-reqbt-3-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3-1.csv", "population": "Caucasian", "test_name": "reqbt-3-1", "evidence_name": "reqbt-3", "comparison_name": "reqbt-3-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-3-reqbt-3-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-3-1.csv", "population": "Hispanic", "test_name": "reqbt-3-1", "evidence_name": "reqbt-3", "comparison_name": "reqbt-3-1", "num_contributors": 2, "num_replicates": 2}

31
cjs-data/init/input/reqbt-3.tsv

@ -0,0 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 Allele 5 Allele 6 Allele 7 ADO UD1
reqbt-3_1 D5S818 9 13 14 false
reqbt-3_1 D19S433 15.2 16 17 false
reqbt-3_1 CSF1PO 9 10 11 12 false
reqbt-3_1 D16S539 11 12 13 false
reqbt-3_1 TH01 6 7 false
reqbt-3_1 FGA 19 21 false
reqbt-3_1 D8S1179 11 13 14 false
reqbt-3_1 D18S51 12 14 false
reqbt-3_1 D3S1358 15 16 17 18 false
reqbt-3_1 vWA 14 15 16 false
reqbt-3_1 D7S820 10 12 false
reqbt-3_1 D13S317 8 10 11 false
reqbt-3_1 D21S11 29 30 31 false
reqbt-3_1 TPOX 8 9 10 false
reqbt-3_1 D2S1338 17 false
reqbt-3_2 D5S818 9 12 14 false
reqbt-3_2 D19S433 13.2 14 14.2 15 15.2 16 17 false
reqbt-3_2 CSF1PO 9 10 false
reqbt-3_2 D16S539 11 12 false
reqbt-3_2 TH01 6 7 false
reqbt-3_2 FGA 19 21 25 false
reqbt-3_2 D8S1179 11 13 14 false
reqbt-3_2 D18S51 12 13 14 17 false
reqbt-3_2 D3S1358 15 16 17 18 false
reqbt-3_2 vWA 15 16 false
reqbt-3_2 D7S820 9 10 12 false
reqbt-3_2 D13S317 8 10 13 false
reqbt-3_2 D21S11 29 30.2 31 false
reqbt-3_2 TPOX 8 9 10 false
reqbt-3_2 D2S1338 17 false

16
cjs-data/init/input/reqbt-4-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-4-1,D21S11,29,29.2
reqbt-4-1,D3S1358,15,16
reqbt-4-1,CSF1PO,12,12
reqbt-4-1,D7S820,11,11
reqbt-4-1,vWA,14,18
reqbt-4-1,D2S1338,20,24
reqbt-4-1,D5S818,11,11
reqbt-4-1,D13S317,11,12
reqbt-4-1,D19S433,14,15.2
reqbt-4-1,TPOX,8,9
reqbt-4-1,D18S51,14,17
reqbt-4-1,D8S1179,13,15
reqbt-4-1,TH01,9,9
reqbt-4-1,D16S539,9,13
reqbt-4-1,FGA,19,23

1
cjs-data/init/input/reqbt-4-reqbt-4-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4-1.csv", "population": "Asian", "test_name": "reqbt-4-1", "evidence_name": "reqbt-4", "comparison_name": "reqbt-4-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-4-reqbt-4-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4-1.csv", "population": "Black", "test_name": "reqbt-4-1", "evidence_name": "reqbt-4", "comparison_name": "reqbt-4-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-4-reqbt-4-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4-1.csv", "population": "Caucasian", "test_name": "reqbt-4-1", "evidence_name": "reqbt-4", "comparison_name": "reqbt-4-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-4-reqbt-4-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-4-1.csv", "population": "Hispanic", "test_name": "reqbt-4-1", "evidence_name": "reqbt-4", "comparison_name": "reqbt-4-1", "num_contributors": 2, "num_replicates": 2}

31
cjs-data/init/input/reqbt-4.tsv

@ -0,0 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 Allele 5 ADO UD1
reqbt-4_1 D21S11 28 29 29.2 31 false
reqbt-4_1 D3S1358 15 16 17 false
reqbt-4_1 CSF1PO 9 10 11 12 false
reqbt-4_1 D7S820 10 11 12 false
reqbt-4_1 vWA 14 15 16 18 false
reqbt-4_1 D2S1338 17 18 20 24 false
reqbt-4_1 D5S818 9 11 14 false
reqbt-4_1 D13S317 8 10 11 12 false
reqbt-4_1 D19S433 14 15.2 17 false
reqbt-4_1 TPOX 8 9 10 false
reqbt-4_1 D18S51 12 14 17 false
reqbt-4_1 D8S1179 11 13 15 false
reqbt-4_1 TH01 6 7 9 false
reqbt-4_1 D16S539 9 11 12 13 false
reqbt-4_1 FGA 19 21 23 false
reqbt-4_2 D21S11 29 29.2 30 31 false
reqbt-4_2 D3S1358 15 16 17 false
reqbt-4_2 CSF1PO 9 10 12 false
reqbt-4_2 D7S820 10 11 12 false
reqbt-4_2 vWA 14 15 16 17 18 false
reqbt-4_2 D2S1338 17 18 20 24 false
reqbt-4_2 D5S818 9 11 12 14 false
reqbt-4_2 D13S317 8 10 11 12 false
reqbt-4_2 D19S433 14 15.2 16 17 false
reqbt-4_2 TPOX 8 9 10 false
reqbt-4_2 D18S51 12 14 17 false
reqbt-4_2 D8S1179 11 13 15 false
reqbt-4_2 TH01 6 7 9 false
reqbt-4_2 D16S539 9 11 12 13 false
reqbt-4_2 FGA 19 21 23 false

16
cjs-data/init/input/reqbt-5-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-5-1,D5S818,9,11
reqbt-5-1,vWA,17,19
reqbt-5-1,D16S539,11,11
reqbt-5-1,D7S820,10,12
reqbt-5-1,CSF1PO,10,10
reqbt-5-1,D19S433,13,15
reqbt-5-1,D3S1358,16,17
reqbt-5-1,D18S51,15,24
reqbt-5-1,TPOX,9,11
reqbt-5-1,D13S317,11,11
reqbt-5-1,FGA,18,21
reqbt-5-1,D8S1179,14,15
reqbt-5-1,D2S1338,20,20
reqbt-5-1,TH01,6,9
reqbt-5-1,D21S11,29,29

16
cjs-data/init/input/reqbt-5-2.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-5-2,D5S818,11,12
reqbt-5-2,vWA,14,18
reqbt-5-2,D16S539,9,11
reqbt-5-2,D7S820,11,11
reqbt-5-2,CSF1PO,10,12
reqbt-5-2,D19S433,12,16
reqbt-5-2,D3S1358,15,18
reqbt-5-2,D18S51,15,22
reqbt-5-2,TPOX,11,11
reqbt-5-2,D13S317,12,12
reqbt-5-2,FGA,24,26
reqbt-5-2,D8S1179,10,12
reqbt-5-2,D2S1338,18,19
reqbt-5-2,TH01,6,9
reqbt-5-2,D21S11,29,31

1
cjs-data/init/input/reqbt-5-reqbt-5-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5-1.csv", "population": "Asian", "test_name": "reqbt-5-1", "evidence_name": "reqbt-5", "comparison_name": "reqbt-5-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-5-reqbt-5-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5-1.csv", "population": "Black", "test_name": "reqbt-5-1", "evidence_name": "reqbt-5", "comparison_name": "reqbt-5-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-5-reqbt-5-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5-1.csv", "population": "Caucasian", "test_name": "reqbt-5-1", "evidence_name": "reqbt-5", "comparison_name": "reqbt-5-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-5-reqbt-5-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5-1.csv", "population": "Hispanic", "test_name": "reqbt-5-1", "evidence_name": "reqbt-5", "comparison_name": "reqbt-5-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-5-reqbt-5-2-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5-2.csv", "population": "Asian", "test_name": "reqbt-5-2", "evidence_name": "reqbt-5", "comparison_name": "reqbt-5-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-5-reqbt-5-2-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-5-2.csv", "population": "Black", "test_name": "reqbt-5-2", "evidence_name": "reqbt-5", "comparison_name": "reqbt-5-2", "num_contributors": 2, "num_replicates": 2}

31
cjs-data/init/input/reqbt-5.tsv

@ -0,0 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 Allele 5 ADO UD1
reqbt-5_1 D5S818 9 11 12 false
reqbt-5_1 vWA 14 17 18 19 false
reqbt-5_1 D16S539 9 11 false
reqbt-5_1 D7S820 9 10 11 12 false
reqbt-5_1 CSF1PO 9 10 12 false
reqbt-5_1 D19S433 12 13 15 15.2 16 false
reqbt-5_1 D3S1358 15 16 17 18 false
reqbt-5_1 D18S51 15 22 false
reqbt-5_1 TPOX 8 10 11 false
reqbt-5_1 D13S317 11 12 false
reqbt-5_1 FGA 18 false
reqbt-5_1 D8S1179 10 11 12 14 15 false
reqbt-5_1 D2S1338 18 19 20 false
reqbt-5_1 TH01 5 6 9 false
reqbt-5_1 D21S11 29 31 false
reqbt-5_2 D5S818 9 11 12 false
reqbt-5_2 vWA 14 17 18 false
reqbt-5_2 D16S539 11 false
reqbt-5_2 D7S820 11 false
reqbt-5_2 CSF1PO 10 12 false
reqbt-5_2 D19S433 12 13 13.2 15 16 false
reqbt-5_2 D3S1358 15 16 17 18 19 false
reqbt-5_2 D18S51 15 22 false
reqbt-5_2 TPOX 11 false
reqbt-5_2 D13S317 11 12 false
reqbt-5_2 FGA 21 24 26 false
reqbt-5_2 D8S1179 10 11 12 14 15 false
reqbt-5_2 D2S1338 19 20 false
reqbt-5_2 TH01 5 6 7 9 false
reqbt-5_2 D21S11 28 29 30.2 31 false

16
cjs-data/init/input/reqbt-6-2.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-6-2,D19S433,14,14
reqbt-6-2,D18S51,13,15
reqbt-6-2,D7S820,8,10
reqbt-6-2,D8S1179,14,14
reqbt-6-2,CSF1PO,12,12
reqbt-6-2,D5S818,12,13
reqbt-6-2,vWA,15,18
reqbt-6-2,D21S11,28,30.2
reqbt-6-2,D16S539,11,13
reqbt-6-2,D3S1358,15,15
reqbt-6-2,D13S317,12,13
reqbt-6-2,FGA,20,23
reqbt-6-2,TH01,8,9.3
reqbt-6-2,D2S1338,20,25
reqbt-6-2,TPOX,8,8

1
cjs-data/init/input/reqbt-6-reqbt-6-2-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6-2.csv", "population": "Asian", "test_name": "reqbt-6-2", "evidence_name": "reqbt-6", "comparison_name": "reqbt-6-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-6-reqbt-6-2-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6-2.csv", "population": "Black", "test_name": "reqbt-6-2", "evidence_name": "reqbt-6", "comparison_name": "reqbt-6-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-6-reqbt-6-2-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6-2.csv", "population": "Caucasian", "test_name": "reqbt-6-2", "evidence_name": "reqbt-6", "comparison_name": "reqbt-6-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/init/input/reqbt-6-reqbt-6-2-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/init/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/init/input/reqbt-6-2.csv", "population": "Hispanic", "test_name": "reqbt-6-2", "evidence_name": "reqbt-6", "comparison_name": "reqbt-6-2", "num_contributors": 2, "num_replicates": 2}

31
cjs-data/init/input/reqbt-6.tsv

@ -0,0 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 ADO UD1
reqbt-6_1 D19S433 14 false
reqbt-6_1 D18S51 13 14 15 false
reqbt-6_1 D7S820 8 10 false
reqbt-6_1 D8S1179 14 false
reqbt-6_1 CSF1PO 11 12 14 false
reqbt-6_1 D5S818 12 13 false
reqbt-6_1 vWA 15 16 18 false
reqbt-6_1 D21S11 28 30.2 false
reqbt-6_1 D16S539 11 12 13 false
reqbt-6_1 D3S1358 14 15 false
reqbt-6_1 D13S317 12 13 false
reqbt-6_1 FGA 20 23 false
reqbt-6_1 TH01 6 8 9.3 false
reqbt-6_1 D2S1338 19 20 25 false
reqbt-6_1 TPOX 8 false
reqbt-6_2 D19S433 15 false
reqbt-6_2 D18S51 13 15 23 false
reqbt-6_2 D7S820 8 10 false
reqbt-6_2 D8S1179 14 false
reqbt-6_2 CSF1PO 12 false
reqbt-6_2 D5S818 11 12 13 false
reqbt-6_2 vWA 15 16 18 19 false
reqbt-6_2 D21S11 28 29 30.2 false
reqbt-6_2 D16S539 11 13 false
reqbt-6_2 D3S1358 16 false
reqbt-6_2 D13S317 12 13 false
reqbt-6_2 FGA 20 21 23 false
reqbt-6_2 TH01 6 8 9.3 false
reqbt-6_2 D2S1338 16 20 25 false
reqbt-6_2 TPOX 8 false

2
cjs-data/init/output/qualitative_reqbt-1-1-Caucasian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-1" "reqbt-1-1" "0.00562026214861974" "0.385" "Caucasian"

2
cjs-data/init/output/qualitative_reqbt-1-1-Hispanic.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-1" "reqbt-1-1" "0.0124947541552853" "0.383" "Hispanic"

2
cjs-data/init/output/qualitative_reqbt-2-1-Asian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-2" "reqbt-2-1" "0.000155662727029042" "0.467" "Asian"

2
cjs-data/init/output/qualitative_reqbt-3-1-Asian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-3" "reqbt-3-1" "62797266791855.1" "0.399" "Asian"

2
cjs-data/init/output/qualitative_reqbt-3-1-Black.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-3" "reqbt-3-1" "2638378726990254" "0.407" "Black"

2
cjs-data/init/output/qualitative_reqbt-3-1-Caucasian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-3" "reqbt-3-1" "251080935416764" "0.4" "Caucasian"

2
cjs-data/init/output/qualitative_reqbt-4-1-Asian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-4" "reqbt-4-1" "219236341.824673" "0.18" "Asian"

2
cjs-data/init/output/qualitative_reqbt-4-1-Black.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-4" "reqbt-4-1" "22830925071.0844" "0.189" "Black"

2
cjs-data/init/output/qualitative_reqbt-4-1-Caucasian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-4" "reqbt-4-1" "3958712305.38487" "0.182" "Caucasian"

2
cjs-data/init/output/qualitative_reqbt-5-1-Asian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-5" "reqbt-5-1" "1404461.05226552" "0.347" "Asian"

2
cjs-data/init/output/qualitative_reqbt-5-1-Black.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-5" "reqbt-5-1" "1778842.82881551" "0.356" "Black"

2
cjs-data/init/output/qualitative_reqbt-5-1-Caucasian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-5" "reqbt-5-1" "1043029.46321545" "0.346" "Caucasian"

2
cjs-data/init/output/qualitative_reqbt-5-1-Hispanic.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-5" "reqbt-5-1" "1588654.55241734" "0.352" "Hispanic"

2
cjs-data/init/output/qualitative_reqbt-5-2-Asian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-5" "reqbt-5-2" "99703085230.7433" "0.348" "Asian"

2
cjs-data/init/output/qualitative_reqbt-6-2-Asian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-6" "reqbt-6-2" "2078162870985.9" "0.563" "Asian"

2
cjs-data/init/output/qualitative_reqbt-6-2-Black.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-6" "reqbt-6-2" "8868749832.76227" "0.563" "Black"

2
cjs-data/init/output/qualitative_reqbt-6-2-Caucasian.csv

@ -0,0 +1,2 @@
"EvidFile" "POI" "LR" "Dropout" "Race"
"reqbt-6" "reqbt-6-2" "1616211719.22568" "0.565" "Caucasian"

16
cjs-data/musky-stabbed-my-ac/input/reqbt-1-1.csv

@ -1,16 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-1-1,D7S820,10,12
reqbt-1-1,D8S1179,14,15
reqbt-1-1,CSF1PO,10,10
reqbt-1-1,D16S539,11,11
reqbt-1-1,D2S1338,20,20
reqbt-1-1,vWA,17,19
reqbt-1-1,D19S433,13,15
reqbt-1-1,D18S51,15,24
reqbt-1-1,D8S1179,14,15
reqbt-1-1,TH01,6,9
reqbt-1-1,FGA,18,21
reqbt-1-1,D3S1358,16,17
reqbt-1-1,D7S820,10,12
reqbt-1-1,TPOX,9,11
reqbt-1-1,D21S11,29,29
reqbt-1-1,D5S818,9,11
reqbt-1-1,vWA,17,19
reqbt-1-1,FGA,18,21
reqbt-1-1,TH01,6,9
reqbt-1-1,D19S433,13,15
reqbt-1-1,D13S317,11,11
reqbt-1-1,D3S1358,16,17
reqbt-1-1,CSF1PO,10,10

46
cjs-data/musky-stabbed-my-ac/input/reqbt-1.tsv

@ -1,42 +1,42 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 ADO UD1
reqbt-1_1 D7S820 10 11 false
reqbt-1_1 D8S1179 10 12 14 false
reqbt-1_1 CSF1PO 12 false
reqbt-1_1 D16S539 9 11 false
reqbt-1_1 D2S1338 19 false
reqbt-1_1 vWA 14 18 false
reqbt-1_1 D19S433 12 13 14 16 false
reqbt-1_1 D18S51 15 17 22 false
reqbt-1_1 D8S1179 10 12 14 false
reqbt-1_1 TH01 6 9 false
reqbt-1_1 FGA 18 24 26 false
reqbt-1_1 D3S1358 15 16 18 false
reqbt-1_1 D7S820 10 11 false
reqbt-1_1 TPOX 11 false
reqbt-1_1 D21S11 29 31 false
reqbt-1_1 D5S818 9 11 12 false
reqbt-1_1 vWA 14 18 false
reqbt-1_1 FGA 18 24 26 false
reqbt-1_1 TH01 6 9 false
reqbt-1_1 D19S433 12 13 14 16 false
reqbt-1_1 D13S317 12 false
reqbt-1_1 D3S1358 15 16 18 false
reqbt-1_1 CSF1PO 12 false
reqbt-1_2 D7S820 10 11 false
reqbt-1_2 D8S1179 10 12 14 false
reqbt-1_2 CSF1PO 10 12 false
reqbt-1_2 D16S539 8 9 11 false
reqbt-1_2 vWA 14 18 false
reqbt-1_2 D19S433 12 15 16 false
reqbt-1_2 D18S51 22 false
reqbt-1_2 D8S1179 10 12 14 false
reqbt-1_2 TH01 6 9 false
reqbt-1_2 FGA 18 24 26 false
reqbt-1_2 D3S1358 15 16 18 false
reqbt-1_2 D7S820 10 11 false
reqbt-1_2 TPOX 8 11 false
reqbt-1_2 D21S11 29 31 false
reqbt-1_2 D5S818 9 11 12 false
reqbt-1_2 vWA 14 18 false
reqbt-1_2 FGA 18 24 26 false
reqbt-1_2 TH01 6 9 false
reqbt-1_2 D19S433 12 15 16 false
reqbt-1_2 D13S317 12 false
reqbt-1_2 D3S1358 15 16 18 false
reqbt-1_2 CSF1PO 10 12 false
reqbt-1_3 D7S820 9 11 false
reqbt-1_3 D16S539 11 false
reqbt-1_3 D8S1179 10 12 14 false
reqbt-1_3 D16S539 11 false
reqbt-1_3 vWA 14 18 false
reqbt-1_3 D19S433 12 15 16 false
reqbt-1_3 TH01 6 9 9.3 false
reqbt-1_3 FGA 24 26 false
reqbt-1_3 D3S1358 15 17 18 false
reqbt-1_3 D7S820 9 11 false
reqbt-1_3 TPOX 11 false
reqbt-1_3 D21S11 29 31 false
reqbt-1_3 D5S818 9 10 11 12 false
reqbt-1_3 vWA 14 18 false
reqbt-1_3 FGA 24 26 false
reqbt-1_3 TH01 6 9 9.3 false
reqbt-1_3 D19S433 12 15 16 false
reqbt-1_3 D13S317 12 false
reqbt-1_3 D3S1358 15 17 18 false

18
cjs-data/musky-stabbed-my-ac/input/reqbt-10-2.csv

@ -1,16 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-10-2,D7S820,10,12
reqbt-10-2,D5S818,12,12
reqbt-10-2,D21S11,31.2,32.2
reqbt-10-2,D3S1358,16,17
reqbt-10-2,D16S539,12,13
reqbt-10-2,D2S1338,18,23
reqbt-10-2,D18S51,12,14
reqbt-10-2,D8S1179,14,15
reqbt-10-2,TPOX,8,8
reqbt-10-2,D21S11,31.2,32.2
reqbt-10-2,D5S818,12,12
reqbt-10-2,D7S820,10,12
reqbt-10-2,D19S433,14,16
reqbt-10-2,vWA,16,19
reqbt-10-2,FGA,20,22
reqbt-10-2,D18S51,12,14
reqbt-10-2,TH01,9,9.3
reqbt-10-2,D19S433,14,16
reqbt-10-2,D2S1338,18,23
reqbt-10-2,D8S1179,14,15
reqbt-10-2,D13S317,11,13
reqbt-10-2,D3S1358,16,17
reqbt-10-2,FGA,20,22
reqbt-10-2,CSF1PO,10,13

36
cjs-data/musky-stabbed-my-ac/input/reqbt-10.tsv

@ -1,31 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 ADO UD1
reqbt-10_1 D7S820 10 12 false
reqbt-10_1 D5S818 11 12 false
reqbt-10_1 D21S11 28 31.2 32.2 false
reqbt-10_1 D3S1358 15 16 17 false
reqbt-10_1 D16S539 12 13 false
reqbt-10_1 D2S1338 18 19 23 false
reqbt-10_1 D18S51 12 14 15 false
reqbt-10_1 D8S1179 14 15 false
reqbt-10_1 TPOX 6 8 false
reqbt-10_1 D21S11 28 31.2 32.2 false
reqbt-10_1 D5S818 11 12 false
reqbt-10_1 D7S820 10 12 false
reqbt-10_1 D19S433 13 14 15 16 false
reqbt-10_1 vWA 16 19 false
reqbt-10_1 FGA 20 22 false
reqbt-10_1 D18S51 12 14 15 false
reqbt-10_1 TH01 9 9.3 false
reqbt-10_1 D19S433 13 14 15 16 false
reqbt-10_1 D2S1338 18 19 23 false
reqbt-10_1 D8S1179 14 15 false
reqbt-10_1 D13S317 11 12 13 false
reqbt-10_1 D3S1358 15 16 17 false
reqbt-10_1 FGA 20 22 false
reqbt-10_1 CSF1PO 10 13 false
reqbt-10_2 D7S820 10 12 false
reqbt-10_2 D5S818 12 false
reqbt-10_2 D21S11 31.2 32.2 false
reqbt-10_2 D3S1358 16 17 false
reqbt-10_2 D16S539 12 13 false
reqbt-10_2 D2S1338 18 23 false
reqbt-10_2 D18S51 12 14 false
reqbt-10_2 D8S1179 14 15 false
reqbt-10_2 TPOX 8 false
reqbt-10_2 D21S11 31.2 32.2 false
reqbt-10_2 D5S818 12 false
reqbt-10_2 D7S820 10 12 false
reqbt-10_2 D19S433 14 16 false
reqbt-10_2 vWA 16 19 false
reqbt-10_2 FGA 20 22 false
reqbt-10_2 D18S51 12 14 false
reqbt-10_2 TH01 9 9.3 false
reqbt-10_2 D19S433 14 16 false
reqbt-10_2 D2S1338 18 23 false
reqbt-10_2 D8S1179 14 15 false
reqbt-10_2 D13S317 11 13 false
reqbt-10_2 D3S1358 16 17 false
reqbt-10_2 FGA 20 22 false
reqbt-10_2 CSF1PO 10 13 false

16
cjs-data/musky-stabbed-my-ac/input/reqbt-100-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-100-1,D7S820,7,8
reqbt-100-1,D16S539,11,11
reqbt-100-1,D2S1338,22,24
reqbt-100-1,D18S51,15,15
reqbt-100-1,D8S1179,11,14
reqbt-100-1,TPOX,12,12
reqbt-100-1,D21S11,29,30
reqbt-100-1,D5S818,11,12
reqbt-100-1,vWA,16,17
reqbt-100-1,FGA,20,24
reqbt-100-1,TH01,6,9.3
reqbt-100-1,D19S433,13,15.2
reqbt-100-1,D13S317,11,13
reqbt-100-1,D3S1358,18,18
reqbt-100-1,CSF1PO,12,12

16
cjs-data/musky-stabbed-my-ac/input/reqbt-100-2.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-100-2,D7S820,10,12
reqbt-100-2,D16S539,11,13
reqbt-100-2,D2S1338,17,19
reqbt-100-2,D18S51,13,17
reqbt-100-2,D8S1179,13,15
reqbt-100-2,TPOX,8,11
reqbt-100-2,D21S11,30,30
reqbt-100-2,D5S818,12,12
reqbt-100-2,vWA,17,17
reqbt-100-2,FGA,22,25
reqbt-100-2,TH01,8,9.3
reqbt-100-2,D19S433,14,15.2
reqbt-100-2,D13S317,10,12
reqbt-100-2,D3S1358,15,17
reqbt-100-2,CSF1PO,10,10

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-1.csv", "population": "Asian", "test_name": "reqbt-100-1", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-1.csv", "population": "Black", "test_name": "reqbt-100-1", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-1.csv", "population": "Caucasian", "test_name": "reqbt-100-1", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-1.csv", "population": "Hispanic", "test_name": "reqbt-100-1", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-2.csv", "population": "Asian", "test_name": "reqbt-100-2", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-2.csv", "population": "Black", "test_name": "reqbt-100-2", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-2.csv", "population": "Caucasian", "test_name": "reqbt-100-2", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-100-reqbt-100-2-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-100-2.csv", "population": "Hispanic", "test_name": "reqbt-100-2", "evidence_name": "reqbt-100", "comparison_name": "reqbt-100-2", "num_contributors": 2, "num_replicates": 2}

31
cjs-data/musky-stabbed-my-ac/input/reqbt-100.tsv

@ -0,0 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 ADO UD1
reqbt-100_1 D7S820 7 8 10 12 false
reqbt-100_1 D16S539 11 13 false
reqbt-100_1 D2S1338 17 19 22 24 false
reqbt-100_1 D18S51 13 15 17 false
reqbt-100_1 D8S1179 11 13 14 15 false
reqbt-100_1 TPOX 8 11 12 false
reqbt-100_1 D21S11 29 30 false
reqbt-100_1 D5S818 11 12 false
reqbt-100_1 vWA 16 17 false
reqbt-100_1 FGA 20 22 24 25 false
reqbt-100_1 TH01 6 8 9.3 false
reqbt-100_1 D19S433 13 14 15.2 false
reqbt-100_1 D13S317 10 11 12 13 false
reqbt-100_1 D3S1358 15 17 18 false
reqbt-100_1 CSF1PO 10 12 false
reqbt-100_2 D7S820 7 8 10 12 false
reqbt-100_2 D16S539 11 13 false
reqbt-100_2 D2S1338 17 19 22 24 false
reqbt-100_2 D18S51 13 15 17 false
reqbt-100_2 D8S1179 11 13 14 15 false
reqbt-100_2 TPOX 8 11 12 false
reqbt-100_2 D21S11 29 30 false
reqbt-100_2 D5S818 11 12 false
reqbt-100_2 vWA 16 17 false
reqbt-100_2 FGA 20 22 24 25 false
reqbt-100_2 TH01 6 8 9.3 false
reqbt-100_2 D19S433 13 14 15.2 false
reqbt-100_2 D13S317 10 11 12 13 false
reqbt-100_2 D3S1358 15 17 18 false
reqbt-100_2 CSF1PO 10 12 false

16
cjs-data/musky-stabbed-my-ac/input/reqbt-101-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-101-1,D7S820,7,8
reqbt-101-1,D16S539,11,11
reqbt-101-1,D2S1338,22,24
reqbt-101-1,D18S51,15,15
reqbt-101-1,D8S1179,11,14
reqbt-101-1,TPOX,12,12
reqbt-101-1,D21S11,29,30
reqbt-101-1,D5S818,11,12
reqbt-101-1,vWA,16,17
reqbt-101-1,FGA,20,24
reqbt-101-1,TH01,6,9.3
reqbt-101-1,D19S433,13,15.2
reqbt-101-1,D13S317,11,13
reqbt-101-1,D3S1358,18,18
reqbt-101-1,CSF1PO,12,12

16
cjs-data/musky-stabbed-my-ac/input/reqbt-101-2.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-101-2,D7S820,11,11
reqbt-101-2,D16S539,9,9
reqbt-101-2,D2S1338,16,17
reqbt-101-2,D18S51,16,18
reqbt-101-2,D8S1179,12,15
reqbt-101-2,TPOX,8,9
reqbt-101-2,D21S11,28,29
reqbt-101-2,D5S818,10,12
reqbt-101-2,vWA,16,20
reqbt-101-2,FGA,22,24
reqbt-101-2,TH01,7,7
reqbt-101-2,D19S433,12,15.2
reqbt-101-2,D13S317,11,14
reqbt-101-2,D3S1358,17,17
reqbt-101-2,CSF1PO,10,12

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-1.csv", "population": "Asian", "test_name": "reqbt-101-1", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-1.csv", "population": "Black", "test_name": "reqbt-101-1", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-1.csv", "population": "Caucasian", "test_name": "reqbt-101-1", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-1.csv", "population": "Hispanic", "test_name": "reqbt-101-1", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-2.csv", "population": "Asian", "test_name": "reqbt-101-2", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-2.csv", "population": "Black", "test_name": "reqbt-101-2", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-2.csv", "population": "Caucasian", "test_name": "reqbt-101-2", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-101-reqbt-101-2-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-101-2.csv", "population": "Hispanic", "test_name": "reqbt-101-2", "evidence_name": "reqbt-101", "comparison_name": "reqbt-101-2", "num_contributors": 2, "num_replicates": 2}

31
cjs-data/musky-stabbed-my-ac/input/reqbt-101.tsv

@ -0,0 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 ADO UD1
reqbt-101_1 D7S820 7 8 11 false
reqbt-101_1 D16S539 9 11 false
reqbt-101_1 D2S1338 16 17 22 24 false
reqbt-101_1 D18S51 15 16 18 false
reqbt-101_1 D8S1179 11 12 14 15 false
reqbt-101_1 TPOX 8 9 12 false
reqbt-101_1 D21S11 28 29 30 false
reqbt-101_1 D5S818 10 11 12 false
reqbt-101_1 vWA 16 17 20 false
reqbt-101_1 FGA 20 22 24 false
reqbt-101_1 TH01 6 7 9.3 false
reqbt-101_1 D19S433 12 13 15.2 false
reqbt-101_1 D13S317 11 13 14 false
reqbt-101_1 D3S1358 17 18 false
reqbt-101_1 CSF1PO 10 12 false
reqbt-101_2 D7S820 7 8 11 false
reqbt-101_2 D16S539 9 11 false
reqbt-101_2 D2S1338 16 17 22 24 false
reqbt-101_2 D18S51 15 16 18 false
reqbt-101_2 D8S1179 11 12 14 15 false
reqbt-101_2 TPOX 8 9 12 false
reqbt-101_2 D21S11 28 29 30 false
reqbt-101_2 D5S818 10 11 12 false
reqbt-101_2 vWA 16 17 20 false
reqbt-101_2 FGA 20 22 24 false
reqbt-101_2 TH01 6 7 9.3 false
reqbt-101_2 D19S433 12 13 15.2 false
reqbt-101_2 D13S317 11 13 14 false
reqbt-101_2 D3S1358 17 18 false
reqbt-101_2 CSF1PO 10 12 false

16
cjs-data/musky-stabbed-my-ac/input/reqbt-102-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-102-1,D7S820,10,12
reqbt-102-1,D16S539,11,13
reqbt-102-1,D2S1338,17,19
reqbt-102-1,D18S51,13,17
reqbt-102-1,D8S1179,13,15
reqbt-102-1,TPOX,8,11
reqbt-102-1,D21S11,30,30
reqbt-102-1,D5S818,12,12
reqbt-102-1,vWA,17,17
reqbt-102-1,FGA,22,25
reqbt-102-1,TH01,8,9.3
reqbt-102-1,D19S433,14,15.2
reqbt-102-1,D13S317,10,12
reqbt-102-1,D3S1358,15,17
reqbt-102-1,CSF1PO,10,10

16
cjs-data/musky-stabbed-my-ac/input/reqbt-102-2.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-102-2,D7S820,7,8
reqbt-102-2,D16S539,11,11
reqbt-102-2,D2S1338,22,24
reqbt-102-2,D18S51,15,15
reqbt-102-2,D8S1179,11,14
reqbt-102-2,TPOX,12,12
reqbt-102-2,D21S11,29,30
reqbt-102-2,D5S818,11,12
reqbt-102-2,vWA,16,17
reqbt-102-2,FGA,20,24
reqbt-102-2,TH01,6,9.3
reqbt-102-2,D19S433,13,15.2
reqbt-102-2,D13S317,11,13
reqbt-102-2,D3S1358,18,18
reqbt-102-2,CSF1PO,12,12

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-1.csv", "population": "Asian", "test_name": "reqbt-102-1", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-1.csv", "population": "Black", "test_name": "reqbt-102-1", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-1.csv", "population": "Caucasian", "test_name": "reqbt-102-1", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-1-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-1.csv", "population": "Hispanic", "test_name": "reqbt-102-1", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-1", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Asian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-2.csv", "population": "Asian", "test_name": "reqbt-102-2", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Black.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-2.csv", "population": "Black", "test_name": "reqbt-102-2", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Caucasian.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-2.csv", "population": "Caucasian", "test_name": "reqbt-102-2", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-2", "num_contributors": 2, "num_replicates": 2}

1
cjs-data/musky-stabbed-my-ac/input/reqbt-102-reqbt-102-2-Hispanic.json

@ -0,0 +1 @@
{"working_dir": "/home/csguest/Desktop/cjs3/cjs-data", "output_dir": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/output", "resource_dir": "/home/csguest/Desktop/cjs3/cjs/data", "evidence_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv", "comparison_file": "/home/csguest/Desktop/cjs3/cjs-data/musky-stabbed-my-ac/input/reqbt-102-2.csv", "population": "Hispanic", "test_name": "reqbt-102-2", "evidence_name": "reqbt-102", "comparison_name": "reqbt-102-2", "num_contributors": 2, "num_replicates": 2}

31
cjs-data/musky-stabbed-my-ac/input/reqbt-102.tsv

@ -0,0 +1,31 @@
Sample Name Marker Allele 1 Allele 2 Allele 3 Allele 4 ADO UD1
reqbt-102_1 D7S820 7 8 10 12 false
reqbt-102_1 D16S539 11 13 false
reqbt-102_1 D2S1338 17 19 22 24 false
reqbt-102_1 D18S51 13 15 17 false
reqbt-102_1 D8S1179 11 13 14 15 false
reqbt-102_1 TPOX 8 11 12 false
reqbt-102_1 D21S11 29 30 false
reqbt-102_1 D5S818 11 12 false
reqbt-102_1 vWA 16 17 false
reqbt-102_1 FGA 20 22 24 25 false
reqbt-102_1 TH01 6 8 9.3 false
reqbt-102_1 D19S433 13 14 15.2 false
reqbt-102_1 D13S317 10 11 12 13 false
reqbt-102_1 D3S1358 15 17 18 false
reqbt-102_1 CSF1PO 10 12 false
reqbt-102_2 D7S820 7 8 10 12 false
reqbt-102_2 D16S539 11 13 false
reqbt-102_2 D2S1338 17 19 22 24 false
reqbt-102_2 D18S51 13 15 17 false
reqbt-102_2 D8S1179 11 13 14 15 false
reqbt-102_2 TPOX 8 11 12 false
reqbt-102_2 D21S11 29 30 false
reqbt-102_2 D5S818 11 12 false
reqbt-102_2 vWA 16 17 false
reqbt-102_2 FGA 20 22 24 25 false
reqbt-102_2 TH01 6 8 9.3 false
reqbt-102_2 D19S433 13 14 15.2 false
reqbt-102_2 D13S317 10 11 12 13 false
reqbt-102_2 D3S1358 15 17 18 false
reqbt-102_2 CSF1PO 10 12 false

16
cjs-data/musky-stabbed-my-ac/input/reqbt-103-1.csv

@ -0,0 +1,16 @@
SampleName,Marker,Allele1,Allele2
reqbt-103-1,D7S820,10,12
reqbt-103-1,D16S539,11,13
reqbt-103-1,D2S1338,17,19
reqbt-103-1,D18S51,13,17
reqbt-103-1,D8S1179,13,15
reqbt-103-1,TPOX,8,11
reqbt-103-1,D21S11,30,30
reqbt-103-1,D5S818,12,12
reqbt-103-1,vWA,17,17
reqbt-103-1,FGA,22,25
reqbt-103-1,TH01,8,9.3
reqbt-103-1,D19S433,14,15.2
reqbt-103-1,D13S317,10,12
reqbt-103-1,D3S1358,15,17
reqbt-103-1,CSF1PO,10,10

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